Genetic variation in progesterone receptor tied to prematurity risk

Humans have unexpectedly high genetic variation in the receptor for a key pregnancy-maintaining hormone, according to research led by scientists at the Stanford University School of Medicine. The finding may help explain why some populations of pregnant women have an elevated risk of premature birth.

The researchers found that East Asian populations have one version of the progesterone receptor gene that appears to protect them against giving birth prematurely, whereas other populations with European or African ancestry have a higher prematurity risk and other versions of this gene. The discrepencies between the populations reflect relatively recent evolution.

Because progesterone and its receptor are so important for pregnancy, the results were unexpected. “People have thought everyone should have a similar version of the progesterone receptor. But our study showed that we have different versions — that there is diversity between individuals and between populations,” said Dr Jingjing Li, an instructor of paediatrics at Stanford and the paper’s lead author. “It really surprised us.”
Spontaneous premature birth, in which a pregnancy ends more than three weeks early, affects 9% of US pregnancies. It is the leading cause of infant death in the United States and the largest contributor to deaths in children younger than five worldwide.

“Preterm birth has probably been with us since the origin of the human species, and being able to track its evolutionary history in a way that sheds new light on current discoveries about prematurity is really exciting,” said Dr Gary Shaw, a professor of paediatrics at Stanford. Shaw shares senior authorship of the paper with Dr David Stevenson, who is also a professor of paediatrics at Stanford.

A reproductive hormone

Progesterone is a reproductive hormone. Its receptor, a protein expressed in tissues such as the uterus, ovary and cervix, binds to the hormone and sends signals that keep pregnant women from going into labor too soon. Changes in the progesterone receptor near the end of pregnancy help trigger labour.

Progesterone is also used as a medication for pregnant women at risk of delivering too early, such as those who have given birth prematurely before. Still, giving extra progesterone to such women does not always prevent an early delivery. No one knows why.

The new study used data from the 1,000 Genomes Project, a publicly accessible database of complete human genomes from people of different ancestral backgrounds. The researchers compared genetic sequences for the progesterone receptor in three populations: Utah residents with European ancestry; Yoruba people in Nigeria; and Han Chinese in Beijing.

The variations in the progesterone receptor gene — consisting of single nucleotide polymorphisms, or one-letter changes in the genetic code — were found in regions of the gene that regulate when it is switched on and off.

Recent natural selection took the genetic code in different directions as different populations adapted to their local environments, the scientists found.
The sequence in Han Chinese populations had an evolutionarily new variation, perhaps reflecting that premature birth would have been especially costly for the small group of ancestral humans who migrated from Africa to East Asia. In contrast, modern populations with European and African ancestry had a greater mixture reflecting new and ancestral versions in the gene.

The findings also predict that the genetic forms of the progesterone receptor seen in East Asians would not necessarily protect against premature birth in other populations. The researchers confirmed this prediction with data from 1,733 African-American women enrolled in a study called the Boston Birth Cohort; of these women, 461 had spontaneous preterm births and 237 had medically indicated preterm births, in which doctors deliver the baby early because of medical problems that have developed during pregnancy for the mother, fetus or both. African-American women who had genetic variants typically seen in East Asian populations had a higher risk of premature birth, the study found.

Genes alone don’t determine risk

The study’s underlying message is that genes that are helpful in one environment may not help in another, Shaw said. “Complex conditions such as prematurity are not likely caused completely environmentally or completely genetically; it’s the confluence of genes and environment that makes the difference in risk,” he said.

The researchers also examined the progesterone receptor in genetic data from four female Neanderthals — one that lived about 122,000 years ago, and three that lived about 52,000 years ago. These individuals had a version of the receptor linked to a high risk of preterm birth. This version of the gene may have been introduced to early human populations by interbreeding between humans and Neanderthals, the findings suggest.